IL_8EVR_064
3D structure
- PDB id
- 8EVR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.87 Å
Loop
- Sequence
- GUCAAC*GGAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8EVR_064 not in the Motif Atlas
- Homologous match to IL_5TBW_062
- Geometric discrepancy: 0.1136
- The information below is about IL_5TBW_062
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_51005.1
- Basepair signature
- cWW-L-R-tWH-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
8EVR|1|A1|G|1500
8EVR|1|A1|U|1501
8EVR|1|A1|C|1502
8EVR|1|A1|A|1503
8EVR|1|A1|A|1504
8EVR|1|A1|C|1505
*
8EVR|1|A1|G|1513
8EVR|1|A1|G|1514
8EVR|1|A1|A|1515
8EVR|1|A1|C|1516
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AP
- 60S ribosomal protein L17-A
- Chain AR
- 60S ribosomal protein L19-A
- Chain Al
- 60S ribosomal protein L39
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