IL_8FIZ_030
3D structure
- PDB id
- 8FIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UGAAAUCC*GAACUG
- Length
- 14 nucleotides
- Bulged bases
- 8FIZ|1|AA|U|632
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FIZ_030 not in the Motif Atlas
- Homologous match to IL_5J7L_030
- Geometric discrepancy: 0.149
- The information below is about IL_5J7L_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.3
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
8FIZ|1|AA|U|605
8FIZ|1|AA|G|606
8FIZ|1|AA|A|607
8FIZ|1|AA|A|608
8FIZ|1|AA|A|609
8FIZ|1|AA|U|610
8FIZ|1|AA|C|611
8FIZ|1|AA|C|612
*
8FIZ|1|AA|G|628
8FIZ|1|AA|A|629
8FIZ|1|AA|A|630
8FIZ|1|AA|C|631
8FIZ|1|AA|U|632
8FIZ|1|AA|G|633
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AI
- 30S ribosomal protein S4
- Chain AO
- 30S ribosomal protein S16
- Chain AQ
- 30S ribosomal protein S8
Coloring options: