IL_8FKY_070
3D structure
- PDB id
- 8FKY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nucleolar pre-60S ribosomal subunit (State F)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- CGAUC*GGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FKY_070 not in the Motif Atlas
- Homologous match to IL_5TBW_067
- Geometric discrepancy: 0.217
- The information below is about IL_5TBW_067
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_95716.2
- Basepair signature
- cWW-cWW-tHS-tHS-tSH-cWW
- Number of instances in this motif group
- 18
Unit IDs
8FKY|1|L3|C|2589
8FKY|1|L3|G|2590
8FKY|1|L3|A|2591
8FKY|1|L3|U|2592
8FKY|1|L3|C|2593
*
8FKY|1|L3|G|2752
8FKY|1|L3|G|2753
8FKY|1|L3|G|2754
8FKY|1|L3|A|2755
8FKY|1|L3|G|2756
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain LJ
- 60S ribosomal protein L27
- Chain LR
- 60S ribosomal protein L34
- Chain SI
- 60S ribosomal protein L7-like 1
- Chain SM
- Pescadillo homolog
Coloring options: