IL_8FL0_084

3D structure

PDB id

8FL0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State H)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

UUG*CUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FL0_084 not in the Motif Atlas

Geometric match to IL_4E48_001

Geometric discrepancy: 0.1497

The information below is about IL_4E48_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

214

Unit IDs

8FL0|1|L4|U|79
8FL0|1|L4|U|80
8FL0|1|L4|G|81
*
8FL0|1|L4|C|95
8FL0|1|L4|U|96
8FL0|1|L4|G|97

Current chains

Chain L4

5S rRNA

Nearby chains

Chain ND

Ribosome production factor 2 homolog