IL_8FL2_070
3D structure
- PDB id
- 8FL2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State I1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- U(PSU)UG*C(A2M)GA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FL2_070 not in the Motif Atlas
- Geometric match to IL_402D_001
- Geometric discrepancy: 0.3044
- The information below is about IL_402D_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_77658.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 34
Unit IDs
8FL2|1|L3|U|1861
8FL2|1|L3|PSU|1862
8FL2|1|L3|U|1863
8FL2|1|L3|G|1864
*
8FL2|1|L3|C|1870
8FL2|1|L3|A2M|1871
8FL2|1|L3|G|1872
8FL2|1|L3|A|1873
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain L4
- 5S ribosomal RNA; 5S rRNA
- Chain NB
- Guanine nucleotide-binding protein-like 3
- Chain NC
- Nucleolar GTP-binding protein 2
- Chain NF
- Ribosome biogenesis protein NSA2 homolog
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