IL_8FL3_106

3D structure

PDB id

8FL3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State I2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

AUC*G(A2M)U

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8FL3_106 not in the Motif Atlas

Geometric match to IL_353D_001

Geometric discrepancy: 0.2022

The information below is about IL_353D_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

8FL3|1|L3|A|3630
8FL3|1|L3|U|3631
8FL3|1|L3|C|3632
*
8FL3|1|L3|G|3829
8FL3|1|L3|A2M|3830
8FL3|1|L3|U|3831

Current chains

Chain L3

28S rRNA

Nearby chains

Chain NC

Nucleolar GTP-binding protein 2