IL_8FL3_181
3D structure
- PDB id
- 8FL3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State I2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.53 Å
Loop
- Sequence
- GAUG*CGC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FL3_181 not in the Motif Atlas
- Geometric match to IL_5TBW_064
- Geometric discrepancy: 0.2369
- The information below is about IL_5TBW_064
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_15698.1
- Basepair signature
- cWW-tSH-cSH-cWW
- Number of instances in this motif group
- 9
Unit IDs
8FL3|1|L4|G|82
8FL3|1|L4|A|83
8FL3|1|L4|U|84
8FL3|1|L4|G|85
*
8FL3|1|L4|C|92
8FL3|1|L4|G|93
8FL3|1|L4|C|94
Current chains
- Chain L4
- 5S rRNA
Nearby chains
- Chain L3
- Large subunit ribosomal RNA; LSU rRNA
- Chain LC
- 60S ribosomal protein L18a
- Chain NB
- Guanine nucleotide-binding protein-like 3
- Chain SD
- 60S ribosomal protein L7
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