IL_8FL3_206
3D structure
- PDB id
- 8FL3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State I2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.53 Å
Loop
- Sequence
- UUG*CUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FL3_206 not in the Motif Atlas
- Homologous match to IL_7A0S_107
- Geometric discrepancy: 0.4523
- The information below is about IL_7A0S_107
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_71625.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 78
Unit IDs
8FL3|1|L4|U|79
8FL3|1|L4|U|80
8FL3|1|L4|G|81
*
8FL3|1|L4|C|95
8FL3|1|L4|U|96
8FL3|1|L4|G|97
Current chains
- Chain L4
- 5S rRNA
Nearby chains
- Chain L3
- Large subunit ribosomal RNA; LSU rRNA
- Chain LC
- 60S ribosomal protein L18a
- Chain NB
- Guanine nucleotide-binding protein-like 3
- Chain SD
- 60S ribosomal protein L7
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