IL_8FL7_192
3D structure
- PDB id
- 8FL7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State J2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.55 Å
Loop
- Sequence
- UGUA(PSU)(OMG)*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- 8FL7|1|L3|U|4634, 8FL7|1|L3|PSU|4636
- QA status
- Modified nucleotides: PSU, OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FL7_192 not in the Motif Atlas
- Homologous match to IL_8P9A_346
- Geometric discrepancy: 0.419
- The information below is about IL_8P9A_346
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_98200.1
- Basepair signature
- cWW-L-R-tHW-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
8FL7|1|L3|U|4632
8FL7|1|L3|G|4633
8FL7|1|L3|U|4634
8FL7|1|L3|A|4635
8FL7|1|L3|PSU|4636
8FL7|1|L3|OMG|4637
*
8FL7|1|L3|C|4662
8FL7|1|L3|G|4663
8FL7|1|L3|A|4664
8FL7|1|L3|A|4665
8FL7|1|L3|G|4666
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain LN
- 60S ribosomal protein L3
- Chain LP
- 60S ribosomal protein L31
- Chain NP
- Zinc finger protein 593
- Chain SV
- Probable ribosome biogenesis protein RLP24
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