IL_8FL9_046
3D structure
- PDB id
- 8FL9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State J3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- GGAUC*GCGCAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FL9_046 not in the Motif Atlas
- Geometric match to IL_4V9F_018
- Geometric discrepancy: 0.289
- The information below is about IL_4V9F_018
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_67427.1
- Basepair signature
- cWW-cWW-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
8FL9|1|L3|G|1425
8FL9|1|L3|G|1426
8FL9|1|L3|A|1427
8FL9|1|L3|U|1428
8FL9|1|L3|C|1429
*
8FL9|1|L3|G|1455
8FL9|1|L3|C|1456
8FL9|1|L3|G|1457
8FL9|1|L3|C|1458
8FL9|1|L3|A|1459
8FL9|1|L3|C|1460
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain LB
- 60S ribosomal protein L18
- Chain LM
- 60S ribosomal protein L29
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