IL_8FL9_131
3D structure
- PDB id
- 8FL9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State J3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CU*AACG
- Length
- 6 nucleotides
- Bulged bases
- 8FL9|1|L3|A|4518, 8FL9|1|L3|C|4519
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FL9_131 not in the Motif Atlas
- Geometric match to IL_4V9F_088
- Geometric discrepancy: 0.0888
- The information below is about IL_4V9F_088
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_44609.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 24
Unit IDs
8FL9|1|L3|C|4458
8FL9|1|L3|U|4459
*
8FL9|1|L3|A|4517
8FL9|1|L3|A|4518
8FL9|1|L3|C|4519
8FL9|1|L3|G|4520
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain L7
- 60S ribosomal protein L13a
- Chain LG
- 60S ribosomal protein L23
- Chain LN
- 60S ribosomal protein L3
- Chain SR
- GTP-binding protein 4
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