IL_8FL9_175
3D structure
- PDB id
- 8FL9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State J3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- (OMU)GAAC*GAA
- Length
- 8 nucleotides
- Bulged bases
- 8FL9|1|L3|A|2428
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FL9_175 not in the Motif Atlas
- Geometric match to IL_6CZR_410
- Geometric discrepancy: 0.3785
- The information below is about IL_6CZR_410
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_47078.2
- Basepair signature
- cWW-cWS-L-cWW-L
- Number of instances in this motif group
- 6
Unit IDs
8FL9|1|L3|OMU|2415
8FL9|1|L3|G|2416
8FL9|1|L3|A|2417
8FL9|1|L3|A|2418
8FL9|1|L3|C|2419
*
8FL9|1|L3|G|2427
8FL9|1|L3|A|2428
8FL9|1|L3|A|2429
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain LA
- 60S ribosomal protein L17
- Chain LD
- 60S ribosomal protein L19
- Chain LZ
- 60S ribosomal protein L39
- Chain SR
- GTP-binding protein 4
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