IL_8FLC_009
3D structure
- PDB id
- 8FLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State K3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- CUGAAUUU*AUUAGUCAG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FLC_009 not in the Motif Atlas
- Geometric match to IL_4WF9_008
- Geometric discrepancy: 0.1535
- The information below is about IL_4WF9_008
- Detailed Annotation
- 9x8 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_93502.1
- Basepair signature
- cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
8FLC|1|L3|C|30
8FLC|1|L3|U|31
8FLC|1|L3|G|32
8FLC|1|L3|A|33
8FLC|1|L3|A|34
8FLC|1|L3|U|35
8FLC|1|L3|U|36
8FLC|1|L3|U|37
*
8FLC|1|L3|A|44
8FLC|1|L3|U|45
8FLC|1|L3|U|46
8FLC|1|L3|A|47
8FLC|1|L3|G|48
8FLC|1|L3|U|49
8FLC|1|L3|C|50
8FLC|1|L3|A|51
8FLC|1|L3|G|52
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain L6
- 60S ribosomal protein L13
- Chain L9
- 60S ribosomal protein L15
- Chain LK
- 60S ribosomal protein L27a
- Chain LV
- 60S ribosomal protein L36a
- Chain LW
- 60S ribosomal protein L37
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