IL_8FRU_051
3D structure
- PDB id
- 8FRU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S subunit of the Giardia lamblia 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- GCGAAC*GCC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FRU_051 not in the Motif Atlas
- Geometric match to IL_4WF9_062
- Geometric discrepancy: 0.1376
- The information below is about IL_4WF9_062
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_12566.5
- Basepair signature
- cWW-L-tHS-L-cWW-L
- Number of instances in this motif group
- 6
Unit IDs
8FRU|1|1|G|1513
8FRU|1|1|C|1514
8FRU|1|1|G|1515
8FRU|1|1|A|1516
8FRU|1|1|A|1517
8FRU|1|1|C|1518
*
8FRU|1|1|G|1833
8FRU|1|1|C|1834
8FRU|1|1|C|1835
Current chains
- Chain 1
- 28S rRNA
Nearby chains
- Chain B
- 60S ribosomal protein uL3
- Chain P
- 60S ribosomal protein uL22
- Chain d
- 60S ribosomal protein eL31
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