IL_8FRU_079
3D structure
- PDB id
- 8FRU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S subunit of the Giardia lamblia 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- GGCU*GAUCC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FRU_079 not in the Motif Atlas
- Geometric match to IL_1J2B_001
- Geometric discrepancy: 0.3856
- The information below is about IL_1J2B_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_69301.1
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
8FRU|1|1|G|2244
8FRU|1|1|G|2245
8FRU|1|1|C|2246
8FRU|1|1|U|2247
*
8FRU|1|1|G|2284
8FRU|1|1|A|2285
8FRU|1|1|U|2286
8FRU|1|1|C|2287
8FRU|1|1|C|2288
Current chains
- Chain 1
- 28S rRNA
Nearby chains
- Chain I
- 60S ribosomal protein uL16
- Chain b
- 60S ribosomal protein eL29
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