IL_8FRU_099
3D structure
- PDB id
- 8FRU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S subunit of the Giardia lamblia 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- UGUACG*CUGAG
- Length
- 11 nucleotides
- Bulged bases
- 8FRU|1|1|G|2666
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FRU_099 not in the Motif Atlas
- Geometric match to IL_5TBW_133
- Geometric discrepancy: 0.1057
- The information below is about IL_5TBW_133
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_83162.8
- Basepair signature
- cWW-cWW-tSH-cWW-tHH-L
- Number of instances in this motif group
- 4
Unit IDs
8FRU|1|1|U|2638
8FRU|1|1|G|2639
8FRU|1|1|U|2640
8FRU|1|1|A|2641
8FRU|1|1|C|2642
8FRU|1|1|G|2643
*
8FRU|1|1|C|2664
8FRU|1|1|U|2665
8FRU|1|1|G|2666
8FRU|1|1|A|2667
8FRU|1|1|G|2668
Current chains
- Chain 1
- 28S rRNA
Nearby chains
- Chain B
- 60S ribosomal protein uL3
- Chain W
- 60S ribosomal protein eL24
- Chain d
- 60S ribosomal protein eL31
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