IL_8FZD_032
3D structure
- PDB id
- 8FZD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with apoRF3, RF1, P- and E-site tRNAPhe (Composite state I-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 8FZD|1|A|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FZD_032 not in the Motif Atlas
- Homologous match to IL_4WF9_036
- Geometric discrepancy: 0.0982
- The information below is about IL_4WF9_036
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_38507.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
8FZD|1|A|C|998
8FZD|1|A|U|999
8FZD|1|A|A|1000
8FZD|1|A|A|1001
8FZD|1|A|G|1002
*
8FZD|1|A|C|1153
8FZD|1|A|G|1154
8FZD|1|A|A|1155
8FZD|1|A|A|1156
8FZD|1|A|G|1157
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L30
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain S
- 50S ribosomal protein L20
- Chain T
- Ribosomal protein L21
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