IL_8FZI_152
3D structure
- PDB id
- 8FZI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGAAAUCC*GAACUG
- Length
- 14 nucleotides
- Bulged bases
- 8FZI|1|a|U|632
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FZI_152 not in the Motif Atlas
- Homologous match to IL_5J7L_030
- Geometric discrepancy: 0.1111
- The information below is about IL_5J7L_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.3
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
8FZI|1|a|U|605
8FZI|1|a|G|606
8FZI|1|a|A|607
8FZI|1|a|A|608
8FZI|1|a|A|609
8FZI|1|a|U|610
8FZI|1|a|C|611
8FZI|1|a|C|612
*
8FZI|1|a|G|628
8FZI|1|a|A|629
8FZI|1|a|A|630
8FZI|1|a|C|631
8FZI|1|a|U|632
8FZI|1|a|G|633
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain d
- 30S ribosomal protein S4
- Chain h
- 30S ribosomal protein S8
- Chain p
- 30S ribosomal protein S16
- Chain q
- 30S ribosomal protein S17
Coloring options: