IL_8FZJ_036
3D structure
- PDB id
- 8FZJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUAAGUG*CUAAA
- Length
- 12 nucleotides
- Bulged bases
- 8FZJ|1|A|A|1143
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8FZJ_036 not in the Motif Atlas
- Homologous match to IL_5J7L_280
- Geometric discrepancy: 0.0818
- The information below is about IL_5J7L_280
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_57188.5
- Basepair signature
- cWW-tWW-L-tWW-cWW-cSH
- Number of instances in this motif group
- 5
Unit IDs
8FZJ|1|A|U|1018
8FZJ|1|A|U|1019
8FZJ|1|A|A|1020
8FZJ|1|A|A|1021
8FZJ|1|A|G|1022
8FZJ|1|A|U|1023
8FZJ|1|A|G|1024
*
8FZJ|1|A|C|1140
8FZJ|1|A|U|1141
8FZJ|1|A|A|1142
8FZJ|1|A|A|1143
8FZJ|1|A|A|1144
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 8
- 50S ribosomal protein L36
- Chain L
- 50S ribosomal protein L13
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