IL_8G2B_164
3D structure
- PDB id
- 8G2B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.55 Å
Loop
- Sequence
- GAUG*CUAAUC
- Length
- 10 nucleotides
- Bulged bases
- 8G2B|1|1a|U|1257, 8G2B|1|1a|A|1280
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8G2B_164 not in the Motif Atlas
- Homologous match to IL_6CZR_161
- Geometric discrepancy: 0.2056
- The information below is about IL_6CZR_161
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_11344.1
- Basepair signature
- cWW-cSS-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
8G2B|1|1a|G|1255
8G2B|1|1a|A|1256
8G2B|1|1a|U|1257
8G2B|1|1a|G|1258
*
8G2B|1|1a|C|1277
8G2B|1|1a|U|1278
8G2B|1|1a|A|1279
8G2B|1|1a|A|1280
8G2B|1|1a|U|1281
8G2B|1|1a|C|1282
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1c
- 30S ribosomal protein S3
- Chain 1j
- 30S ribosomal protein S10
- Chain 1n
- 30S ribosomal protein S14 type Z
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