IL_8G2U_060

3D structure

PDB id

8G2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGUAG*UGAGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G2U_060 not in the Motif Atlas

Homologous match to IL_5J7L_300

Geometric discrepancy: 0.182

The information below is about IL_5J7L_300

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_38862.4

Basepair signature

cWW-cSH-R-tWH-tHS-cWW

Number of instances in this motif group

5

Unit IDs

8G2U|1|B|U|1474
8G2U|1|B|G|1475
8G2U|1|B|U|1476
8G2U|1|B|A|1477
8G2U|1|B|G|1478
*
8G2U|1|B|U|1513
8G2U|1|B|G|1514
8G2U|1|B|A|1515
8G2U|1|B|G|1516
8G2U|1|B|G|1517

Current chains

Chain B

23S rRNA

Nearby chains