IL_8G2U_164

3D structure

PDB id

8G2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUG*CAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: UUG,CAA

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G2U_164 not in the Motif Atlas

Geometric match to IL_7A0S_026

Geometric discrepancy: 0.3322

The information below is about IL_7A0S_026

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

213

Unit IDs

8G2U|1|v|U|1122
8G2U|1|v|U|1123
8G2U|1|v|G|1124
*
8G2U|1|v|C|1149
8G2U|1|v|A|1150
8G2U|1|v|A|1151

Current chains

Chain v

16S rRNA

Nearby chains

Chain h

30S ribosomal protein S9

Chain i

30S ribosomal protein S10