IL_8G2U_173

3D structure

PDB id

8G2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

8G2U|1|v|C|1400, 8G2U|1|v|A|1503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G2U_173 not in the Motif Atlas

Geometric match to IL_5J7L_058

Geometric discrepancy: 0.1139

The information below is about IL_5J7L_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

8G2U|1|v|C|1399
8G2U|1|v|C|1400
8G2U|1|v|G|1401
*
8G2U|1|v|C|1501
8G2U|1|v|A|1502
8G2U|1|v|A|1503
8G2U|1|v|G|1504

Current chains

Chain v

16S rRNA

Nearby chains