IL_8G2U_185

3D structure

PDB id

8G2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G2U_185 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.1016

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

8G2U|1|B|U|1851
8G2U|1|B|U|1852
8G2U|1|B|A|1853
8G2U|1|B|A|1854
8G2U|1|B|U|1855
8G2U|1|B|U|1856
8G2U|1|B|G|1857
8G2U|1|B|A|1858
8G2U|1|B|U|1859
8G2U|1|B|G|1860
*
8G2U|1|B|U|1882
8G2U|1|B|U|1883
8G2U|1|B|G|1884
8G2U|1|B|A|1885
8G2U|1|B|U|1886
8G2U|1|B|C|1887
8G2U|1|B|G|1888
8G2U|1|B|A|1889
8G2U|1|B|A|1890
8G2U|1|B|G|1891

Current chains

Chain B

23S rRNA

Nearby chains