3D structure

PDB id
8G31 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CC*GAAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_8G31_003 not in the Motif Atlas
Homologous match to IL_8C3A_145
Geometric discrepancy: 0.5021
The information below is about IL_8C3A_145
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_15052.3
Basepair signature
cWW-L-cWW-L
Number of instances in this motif group
8

Unit IDs

8G31|1|A|C|30
8G31|1|A|C|31
*
8G31|1|A|G|51
8G31|1|A|A|52
8G31|1|A|A|53
8G31|1|A|G|54

Current chains

Chain A
5S

Nearby chains

Chain F
50S ribosomal protein L5
Chain O
50S ribosomal protein L18

Coloring options:


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