3D structure

PDB id
8G31 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
UGAAG*UGGAG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_8G31_026 not in the Motif Atlas
Homologous match to IL_7RQB_021
Geometric discrepancy: 0.1616
The information below is about IL_7RQB_021
Detailed Annotation
Triple sheared
Broad Annotation
No text annotation
Motif group
IL_56467.8
Basepair signature
cWW-tSH-tSH-tHS-cWW
Number of instances in this motif group
29

Unit IDs

8G31|1|B|U|703
8G31|1|B|G|704
8G31|1|B|A|705
8G31|1|B|A|706
8G31|1|B|G|707
*
8G31|1|B|U|724
8G31|1|B|G|725
8G31|1|B|G|726
8G31|1|B|A|727
8G31|1|B|G|728

Current chains

Chain B
23S

Nearby chains

Chain C
50S ribosomal protein L2

Coloring options:


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