IL_8G31_083

3D structure

PDB id

8G31 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AA*UACU

Length

6 nucleotides

Bulged bases

8G31|1|B|A|2439

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G31_083 not in the Motif Atlas

Homologous match to IL_7RQB_081

Geometric discrepancy: 0.1004

The information below is about IL_7RQB_081

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_42622.4

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

33

Unit IDs

8G31|1|B|A|2070
8G31|1|B|A|2071
*
8G31|1|B|U|2438
8G31|1|B|A|2439
8G31|1|B|C|2440
8G31|1|B|U|2441

Current chains

Chain B

23S

Nearby chains

Chain C

50S ribosomal protein L2