3D structure

PDB id
8G31 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
GAUAAG*CGAAAC
Length
12 nucleotides
Bulged bases
8G31|1|B|A|2765
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_8G31_107 not in the Motif Atlas
Geometric match to IL_5J7L_350
Geometric discrepancy: 0.1099
The information below is about IL_5J7L_350
Detailed Annotation
UAA/GAN with extra cWW
Broad Annotation
No text annotation
Motif group
IL_49767.8
Basepair signature
cWW-cWW-tWH-L-tHS-cWW
Number of instances in this motif group
6

Unit IDs

8G31|1|B|G|2737
8G31|1|B|A|2738
8G31|1|B|U|2739
8G31|1|B|A|2740
8G31|1|B|A|2741
8G31|1|B|G|2742
*
8G31|1|B|C|2762
8G31|1|B|G|2763
8G31|1|B|A|2764
8G31|1|B|A|2765
8G31|1|B|A|2766
8G31|1|B|C|2767

Current chains

Chain B
23S

Nearby chains

Chain 4
50S ribosomal protein L36
Chain G
50S ribosomal protein L6
Chain J
50S ribosomal protein L13

Coloring options:


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