IL_8G61_030

3D structure

PDB id

8G61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.94 Å

Loop

Sequence

CGUG*CCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G61_030 not in the Motif Atlas

Geometric match to IL_4N0T_004

Geometric discrepancy: 0.398

The information below is about IL_4N0T_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_32983.1

Basepair signature

cWW-L-cWW-cWW

Number of instances in this motif group

7

Unit IDs

8G61|1|L5|C|490
8G61|1|L5|G|491
8G61|1|L5|U|492
8G61|1|L5|G|493
*
8G61|1|L5|C|661
8G61|1|L5|C|662
8G61|1|L5|G|663

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LQ

60S ribosomal protein L18