IL_8G61_295

3D structure

PDB id

8G61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.94 Å

Loop

Sequence

CGGUAA*(PSU)AAAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G61|1|L5|C|1732
8G61|1|L5|G|1733
8G61|1|L5|G|1734
8G61|1|L5|U|1735
8G61|1|L5|A|1736
8G61|1|L5|A|1737
*
8G61|1|L5|PSU|1792
8G61|1|L5|A|1793
8G61|1|L5|A|1794
8G61|1|L5|A|1795
8G61|1|L5|U|1796
8G61|1|L5|G|1797

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L7

5S ribosomal RNA; 5S rRNA

Chain LD

60S ribosomal protein L5

Chain LF

60S ribosomal protein L7

Chain LI

60S ribosomal protein L10

Chain LT

60S ribosomal protein L21