IL_8G6W_029
3D structure
- PDB id
- 8G6W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.02 Å
Loop
- Sequence
- UGAAAUCC*GAACUG
- Length
- 14 nucleotides
- Bulged bases
- 8G6W|1|A|U|632
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8G6W_029 not in the Motif Atlas
- Homologous match to IL_5J7L_030
- Geometric discrepancy: 0.1373
- The information below is about IL_5J7L_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.3
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
8G6W|1|A|U|605
8G6W|1|A|G|606
8G6W|1|A|A|607
8G6W|1|A|A|608
8G6W|1|A|A|609
8G6W|1|A|U|610
8G6W|1|A|C|611
8G6W|1|A|C|612
*
8G6W|1|A|G|628
8G6W|1|A|A|629
8G6W|1|A|A|630
8G6W|1|A|C|631
8G6W|1|A|U|632
8G6W|1|A|G|633
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain D
- 30S ribosomal protein S4
- Chain H
- 30S ribosomal protein S8
- Chain P
- 30S ribosomal protein S16
Coloring options: