3D structure

PDB id
8G7P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
CUAAG*CGAAG
Length
10 nucleotides
Bulged bases
8G7P|1|A|A|1156
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_8G7P_034 not in the Motif Atlas
Homologous match to IL_7A0S_033
Geometric discrepancy: 0.0881
The information below is about IL_7A0S_033
Detailed Annotation
UAA/GAN
Broad Annotation
No text annotation
Motif group
IL_08938.1
Basepair signature
cWW-tWH-L-tHS-cWW
Number of instances in this motif group
22

Unit IDs

8G7P|1|A|C|998
8G7P|1|A|U|999
8G7P|1|A|A|1000
8G7P|1|A|A|1001
8G7P|1|A|G|1002
*
8G7P|1|A|C|1153
8G7P|1|A|G|1154
8G7P|1|A|A|1155
8G7P|1|A|A|1156
8G7P|1|A|G|1157

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain 2
50S ribosomal protein L30
Chain B
5S ribosomal RNA; 5S rRNA
Chain S
50S ribosomal protein L20
Chain T
Ribosomal protein L21

Coloring options:


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