IL_8GHU_048
3D structure
- PDB id
- 8GHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methyltransferase RmtC bound to the 30S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUAAC*GAGG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8GHU_048 not in the Motif Atlas
- Geometric match to IL_8VTW_108
- Geometric discrepancy: 0.3955
- The information below is about IL_8VTW_108
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49093.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
8GHU|1|a|U|1444
8GHU|1|a|U|1445
8GHU|1|a|A|1446
8GHU|1|a|A|1447
8GHU|1|a|C|1448
*
8GHU|1|a|G|1455
8GHU|1|a|A|1456
8GHU|1|a|G|1457
8GHU|1|a|G|1458
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain t
- 30S ribosomal protein S20
Coloring options: