IL_8GLP_274
3D structure
- PDB id
- 8GLP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.67 Å
Loop
- Sequence
- CCG*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 8GLP|1|S2|C|1701, 8GLP|1|S2|A|1835
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8GLP_274 not in the Motif Atlas
- Homologous match to IL_4V88_463
- Geometric discrepancy: 0.1048
- The information below is about IL_4V88_463
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61438.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
8GLP|1|S2|C|1700
8GLP|1|S2|C|1701
8GLP|1|S2|G|1702
*
8GLP|1|S2|C|1833
8GLP|1|S2|A|1834
8GLP|1|S2|A|1835
8GLP|1|S2|G|1836
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain Pt
- Transfer RNA; tRNA
- Chain SO
- 40S ribosomal protein S14
- Chain Sa
- 40S ribosomal protein S26
- Chain mR
- mRNA
Coloring options: