IL_8HFR_101
3D structure
- PDB id
- 8HFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NPC-trapped pre-60S particle
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.64 Å
Loop
- Sequence
- GUCC*GC
- Length
- 6 nucleotides
- Bulged bases
- 8HFR|1|1e|C|2772
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8HFR_101 not in the Motif Atlas
- Geometric match to IL_5J7L_032
- Geometric discrepancy: 0.1541
- The information below is about IL_5J7L_032
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_26793.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 16
Unit IDs
8HFR|1|1e|G|2770
8HFR|1|1e|U|2771
8HFR|1|1e|C|2772
8HFR|1|1e|C|2773
*
8HFR|1|1e|G|2787
8HFR|1|1e|C|2788
Current chains
- Chain 1e
- 25S ribosomal RNA
Nearby chains
- Chain LL
- 60S ribosomal protein L13-A
- Chain Qk
- 60S ribosomal protein L18-A
- Chain aw
- 60S ribosomal protein L28
- Chain mS
- 60S ribosomal protein L42-A
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