IL_8IBY_009
3D structure
- PDB id
- 8IBY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of R2 with 5'ORF
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.47 Å
Loop
- Sequence
- UG*UCAA
- Length
- 6 nucleotides
- Bulged bases
- 8IBY|1|E|C|186, 8IBY|1|E|A|187
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8IBY_009 not in the Motif Atlas
- Geometric match to IL_6CZR_119
- Geometric discrepancy: 0.3699
- The information below is about IL_6CZR_119
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_33761.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
8IBY|1|E|U|175
8IBY|1|E|G|176
*
8IBY|1|E|U|185
8IBY|1|E|C|186
8IBY|1|E|A|187
8IBY|1|E|A|188
Current chains
- Chain E
- 5'ORF RNA
Nearby chains
- Chain C
- Reverse transcriptase-like protein
Coloring options: