IL_8IFE_147

3D structure

PDB id

8IFE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Arbekacin-added human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.57 Å

Loop

Sequence

ACAUUU*ACCAU

Length

11 nucleotides

Bulged bases

8IFE|1|1A|C|4670

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IFE|1|1A|A|4624
8IFE|1|1A|C|4625
8IFE|1|1A|A|4626
8IFE|1|1A|U|4627
8IFE|1|1A|U|4628
8IFE|1|1A|U|4629
*
8IFE|1|1A|A|4669
8IFE|1|1A|C|4670
8IFE|1|1A|C|4671
8IFE|1|1A|A|4672
8IFE|1|1A|U|4673

Current chains

Chain 1A

28S ribosomal RNA

Nearby chains

Chain 1E

60S ribosomal protein L3

Chain 2P

60S ribosomal protein L23

Chain 2Q

60S ribosomal protein L24