IL_8INE_065
3D structure
- PDB id
- 8INE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State G'
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- G(OMG)G*UAAUC
- Length
- 8 nucleotides
- Bulged bases
- 8INE|1|2|A|1637, 8INE|1|2|A|1638
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8INE_065 not in the Motif Atlas
- Geometric match to IL_5TBW_033
- Geometric discrepancy: 0.0946
- The information below is about IL_5TBW_033
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.8
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
8INE|1|2|G|1624
8INE|1|2|OMG|1625
8INE|1|2|G|1626
*
8INE|1|2|U|1636
8INE|1|2|A|1637
8INE|1|2|A|1638
8INE|1|2|U|1639
8INE|1|2|C|1640
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain 4
- GTP-binding protein 4
- Chain M
- 60S ribosomal protein L37
- Chain U
- 60S ribosomal protein L15
- Chain Y
- 60S ribosomal protein L17
- Chain m
- 60S ribosomal protein L8
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