IL_8IP8_037

3D structure

PDB id

8IP8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wheat 80S ribosome stalled on AUG-Stop boron dependently

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGG*UAAUC

Length

8 nucleotides

Bulged bases

8IP8|1|RB|G|911, 8IP8|1|RB|A|923, 8IP8|1|RB|A|924

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8IP8_037 not in the Motif Atlas

Homologous match to IL_8C3A_036

Geometric discrepancy: 0.0774

The information below is about IL_8C3A_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_90991.8

Basepair signature

cWW-cWW

Number of instances in this motif group

6

Unit IDs

8IP8|1|RB|G|910
8IP8|1|RB|G|911
8IP8|1|RB|G|912
*
8IP8|1|RB|U|922
8IP8|1|RB|A|923
8IP8|1|RB|A|924
8IP8|1|RB|U|925
8IP8|1|RB|C|926

Current chains

Chain RB

60S ribosomal RNA

Nearby chains

Chain DA

60S ribosomal protein uL2

Chain HA

60S ribosomal protein eL15

Chain MA

60S ribosomal protein uL22

Chain UA

60S ribosomal protein eL37