IL_8IP8_048
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GCAUUG*CGAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8IP8_048 not in the Motif Atlas
- Homologous match to IL_8C3A_046
- Geometric discrepancy: 0.5057
- The information below is about IL_8C3A_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_53206.1
- Basepair signature
- cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
8IP8|1|RB|G|1017
8IP8|1|RB|C|1018
8IP8|1|RB|A|1019
8IP8|1|RB|U|1020
8IP8|1|RB|U|1021
8IP8|1|RB|G|1022
*
8IP8|1|RB|C|1038
8IP8|1|RB|G|1039
8IP8|1|RB|A|1040
8IP8|1|RB|C|1041
Current chains
- Chain RB
- 60S ribosomal RNA
Nearby chains
- Chain EA
- 60S ribosomal protein uL5
- Chain HB
- 60S ribosomal protein uL16
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