IL_8IP8_053
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUACG*CCACA
- Length
- 10 nucleotides
- Bulged bases
- 8IP8|1|RB|C|1335
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8IP8_053 not in the Motif Atlas
- Homologous match to IL_8C3A_051
- Geometric discrepancy: 0.1616
- The information below is about IL_8C3A_051
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
8IP8|1|RB|U|1170
8IP8|1|RB|U|1171
8IP8|1|RB|A|1172
8IP8|1|RB|C|1173
8IP8|1|RB|G|1174
*
8IP8|1|RB|C|1332
8IP8|1|RB|C|1333
8IP8|1|RB|A|1334
8IP8|1|RB|C|1335
8IP8|1|RB|A|1336
Current chains
- Chain RB
- 60S ribosomal RNA
Nearby chains
- Chain CB
- 60S ribosomal protein uL30
- Chain JA
- 60S ribosomal protein eL18
- Chain MB
- 60S ribosomal protein eL33
- Chain TA
- 60S ribosomal protein eL32
- Chain TB
- 5S ribosomal RNA; 5S rRNA
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