IL_8IP8_064
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGC*GGUG
- Length
- 7 nucleotides
- Bulged bases
- 8IP8|1|RB|G|1432
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8IP8_064 not in the Motif Atlas
- Homologous match to IL_8C3A_061
- Geometric discrepancy: 0.0759
- The information below is about IL_8C3A_061
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73554.3
- Basepair signature
- cWW-cWS-cWW
- Number of instances in this motif group
- 10
Unit IDs
8IP8|1|RB|C|1380
8IP8|1|RB|G|1381
8IP8|1|RB|C|1382
*
8IP8|1|RB|G|1431
8IP8|1|RB|G|1432
8IP8|1|RB|U|1433
8IP8|1|RB|G|1434
Current chains
- Chain RB
- 60S ribosomal RNA
Nearby chains
- Chain EB
- 60S ribosomal protein uL4
- Chain IA
- 60S ribosomal protein uL15
- Chain QA
- 60S ribosomal protein eL28
- Chain TA
- 60S ribosomal protein eL32
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