IL_8IP8_079
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUAAC*GGAAGA
- Length
- 11 nucleotides
- Bulged bases
- 8IP8|1|RB|G|1749
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8IP8_079 not in the Motif Atlas
- Homologous match to IL_8P9A_299
- Geometric discrepancy: 0.0712
- The information below is about IL_8P9A_299
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_25943.1
- Basepair signature
- cWW-tWH-tHH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
8IP8|1|RB|U|1691
8IP8|1|RB|U|1692
8IP8|1|RB|A|1693
8IP8|1|RB|A|1694
8IP8|1|RB|C|1695
*
8IP8|1|RB|G|1745
8IP8|1|RB|G|1746
8IP8|1|RB|A|1747
8IP8|1|RB|A|1748
8IP8|1|RB|G|1749
8IP8|1|RB|A|1750
Current chains
- Chain RB
- 60S ribosomal RNA
Nearby chains
- Chain NB
- 60S ribosomal protein eL38
- Chain PB
- 60S ribosomal protein eL34
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