IL_8IP8_143
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGUAAG*CUGAG
- Length
- 11 nucleotides
- Bulged bases
- 8IP8|1|RB|G|3356
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8IP8_143 not in the Motif Atlas
- Homologous match to IL_8C3A_139
- Geometric discrepancy: 0.0723
- The information below is about IL_8C3A_139
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_83162.8
- Basepair signature
- cWW-cWW-tSH-cWW-tHH-L
- Number of instances in this motif group
- 4
Unit IDs
8IP8|1|RB|U|3319
8IP8|1|RB|G|3320
8IP8|1|RB|U|3321
8IP8|1|RB|A|3322
8IP8|1|RB|A|3323
8IP8|1|RB|G|3324
*
8IP8|1|RB|C|3354
8IP8|1|RB|U|3355
8IP8|1|RB|G|3356
8IP8|1|RB|A|3357
8IP8|1|RB|G|3358
Current chains
- Chain RB
- 60S ribosomal RNA
Nearby chains
- Chain DB
- 60S ribosomal protein uL3
- Chain OA
- 60S ribosomal protein eL24
- Chain SA
- 60S ribosomal protein eL31
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