IL_8IP8_159
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UCAAA*UGACAA
- Length
- 11 nucleotides
- Bulged bases
- 8IP8|1|aa|A|472
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8IP8_159 not in the Motif Atlas
- Homologous match to IL_8C3A_394
- Geometric discrepancy: 0.118
- The information below is about IL_8C3A_394
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_30569.1
- Basepair signature
- cWW-cWW-L-R-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
8IP8|1|aa|U|37
8IP8|1|aa|C|38
8IP8|1|aa|A|39
8IP8|1|aa|A|40
8IP8|1|aa|A|41
*
8IP8|1|aa|U|470
8IP8|1|aa|G|471
8IP8|1|aa|A|472
8IP8|1|aa|C|473
8IP8|1|aa|A|474
8IP8|1|aa|A|475
Current chains
- Chain aa
- 18S ribosomal RNA
Nearby chains
- Chain eb
- 40S ribosomal protein uS4
- Chain ja
- 40S ribosomal protein eS4
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