IL_8IP9_075
3D structure
- PDB id
- 8IP9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 40S ribosome in complex with a tRNAi
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- ACUA*UUCU
- Length
- 8 nucleotides
- Bulged bases
- 8IP9|1|aa|C|1350, 8IP9|1|aa|U|1351
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8IP9_075 not in the Motif Atlas
- Homologous match to IL_4V88_456
- Geometric discrepancy: 0.1474
- The information below is about IL_4V88_456
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_76458.1
- Basepair signature
- cWW-cSH-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
8IP9|1|aa|A|1349
8IP9|1|aa|C|1350
8IP9|1|aa|U|1351
8IP9|1|aa|A|1352
*
8IP9|1|aa|U|1383
8IP9|1|aa|U|1384
8IP9|1|aa|C|1385
8IP9|1|aa|U|1386
Current chains
- Chain aa
- 18S ribosomal RNA
Nearby chains
- Chain ha
- RACK1
- Chain ia
- 40S ribosomal protein uS3
- Chain la
- 40S ribosomal protein uS9
- Chain ma
- 40S ribosomal protein uS10
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