IL_8IR1_139

3D structure

PDB id

8IR1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

ACAUUU*AC(B8T)AU

Length

11 nucleotides

Bulged bases

8IR1|1|2|C|4670

QA status

Modified nucleotides: B8T

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IR1|1|2|A|4624
8IR1|1|2|C|4625
8IR1|1|2|A|4626
8IR1|1|2|U|4627
8IR1|1|2|U|4628
8IR1|1|2|U|4629
*
8IR1|1|2|A|4669
8IR1|1|2|C|4670
8IR1|1|2|B8T|4671
8IR1|1|2|A|4672
8IR1|1|2|U|4673

Current chains

Chain 2

28S rRNA

Nearby chains

Chain 7

Probable ribosome biogenesis protein RLP24

Chain B

60S ribosomal protein L3

Chain e

60S ribosomal protein L23