3D structure

PDB id
8JSG (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 30S-IF3 complex from Escherichia coli
Experimental method
ELECTRON MICROSCOPY
Resolution
4.6 Å

Loop

Sequence
CAG*CAGAAG
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_8JSG_025 not in the Motif Atlas
Homologous match to IL_5J7L_021
Geometric discrepancy: 0.5904
The information below is about IL_5J7L_021
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_33323.1
Basepair signature
cWW-L-R-L-cWW-L-L
Number of instances in this motif group
2

Unit IDs

8JSG|1|g|C|440
8JSG|1|g|A|441
8JSG|1|g|G|442
*
8JSG|1|g|C|492
8JSG|1|g|A|493
8JSG|1|g|G|494
8JSG|1|g|A|495
8JSG|1|g|A|496
8JSG|1|g|G|497

Current chains

Chain g
16S ribosomal RNA

Nearby chains

Chain l
Small ribosomal subunit protein uS4

Coloring options:


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