IL_8JSG_034

3D structure

PDB id

8JSG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 30S-IF3 complex from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

UAAG*CUG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8JSG_034 not in the Motif Atlas

Homologous match to IL_6CZR_136

Geometric discrepancy: 0.3557

The information below is about IL_6CZR_136

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05564.3

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

14

Unit IDs

8JSG|1|g|U|594
8JSG|1|g|A|595
8JSG|1|g|A|596
8JSG|1|g|G|597
*
8JSG|1|g|C|643
8JSG|1|g|U|644
8JSG|1|g|G|645

Current chains

Chain g

16S ribosomal RNA

Nearby chains

Chain P

Small ribosomal subunit protein uS17

Chain p

Small ribosomal subunit protein uS8