IL_8JSG_041
3D structure
- PDB id
- 8JSG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 30S-IF3 complex from Escherichia coli
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- AGAAUU*AGGAAU
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8JSG_041 not in the Motif Atlas
- Homologous match to IL_4LFB_030
- Geometric discrepancy: 0.1278
- The information below is about IL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04668.2
- Basepair signature
- cWW-cWW-cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 8
Unit IDs
8JSG|1|g|A|673
8JSG|1|g|G|674
8JSG|1|g|A|675
8JSG|1|g|A|676
8JSG|1|g|U|677
8JSG|1|g|U|678
*
8JSG|1|g|A|712
8JSG|1|g|G|713
8JSG|1|g|G|714
8JSG|1|g|A|715
8JSG|1|g|A|716
8JSG|1|g|U|717
Current chains
- Chain g
- 16S ribosomal RNA
Nearby chains
- Chain 1
- Small ribosomal subunit protein bS18
- Chain n
- Small ribosomal subunit protein bS6, non-modified isoform
- Chain q
- Small ribosomal subunit protein uS11
Coloring options: